Kraeuter et al. published an example application of our methods to speed up a NetLogo 3D model of part of the human brain:

Kraeuter, Kayla; Reith, Carley; Kolber, Benedict J.; and Miller Neilan, Rachael (2024) “Improved Efficiency and Sensitivity Analysis of 3-D Agent-based Model for Pain-related Neural Activity in the Amygdala,” Spora: A Journal of Biomathematics: Vol. 10, 65–82.
DOI: https://doi.org/10.61403/2473-5493.1094
Available at: https://ir.library.illinoisstate.edu/spora/vol10/iss1/8